PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_011350_yiue.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 361aa    MW: 39296.5 Da    PI: 8.9171
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_011350_yiue.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-09201259563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs +RK  ++ eLe++v++L++e ++L  ++  l+     l+ e+
  Bv1_011350_yiue.t1 201 KRAKRILANRQSAARSKERKIRYTGELERRVQTLQTEATTLSAQVTLLQRDTTGLTVEN 259
                         9*******************************************999998877777666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-16197261IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.634199262IPR004827Basic-leucine zipper domain
PfamPF001703.1E-8201252IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.8E-11201255No hitNo description
SuperFamilySSF579591.27E-10201253No hitNo description
CDDcd147031.56E-22202251No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MNNPANYSKL SQQHQVDPSP QRGGPHHRRA LSDTTFRFSG DEDDDFLFDI DNFNLSSLDL  60
IPPSPSPPQL AASMPVDSSR SDESSGDNRS SSTSSRLPQT YNNNNSSNIP VAAHLRSLSV  120
DADFFDGLSF GGGAGGGGAG GIGIGIEGGE RKVGMHRRTS SMDGGSSSSS MMFEGESMLV  180
DGVKKAMPPE RLAELALIDP KRAKRILANR QSAARSKERK IRYTGELERR VQTLQTEATT  240
LSAQVTLLQR DTTGLTVENK ELKLRLQALE QQAQLRDALN EALRQEVQRL RIATGQIPPG  300
NNSSGRGMFS QFPTHAQNAQ SFGGQQNQQQ QQFHIPDQAA ANNAGAHKQL KPNFMDFNHK  360
I
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680531.10.0PREDICTED: transcription factor VIP1
SwissprotQ9MA751e-75VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0J8D1510.0A0A0J8D151_BETVU; Uncharacterized protein
STRINGVIT_18s0076g00330.t011e-101(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.15e-48VIRE2-interacting protein 1